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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV74267.1Tricarboxylate transport membrane protein TctA. (522 aa)    
Predicted Functional Partners:
SFV74269.1
Putative exported protein.
  
 0.939
SFV72563.1
Tricarboxylate transport membrane protein TctA.
  
  
 
0.917
SFV72221.1
Tricarboxylate transport membrane protein TctA.
  
  
 
0.913
SFV72219.1
Tricarboxylate transport protein TctC.
 
  
 0.874
SFV72564.1
Tricarboxylate transport protein TctC.
 
  
 0.874
SFV74268.1
FIG00604460: hypothetical protein.
       0.697
SFV74266.1
Gluconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.566
SFV72220.1
Tricarboxylate transport protein TctB.
  
  
 0.541
SFV74265.1
Iron-sulfur cluster binding protein.
 
     0.514
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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