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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV74439.1Uncharacterized secreted protein associated with spyDAC. (309 aa)    
Predicted Functional Partners:
dacA
Diadenylate cyclase spyDAC; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
 
  
 0.967
SFV73998.1
FIG00603463: hypothetical protein.
  
     0.715
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
  
 0.711
SFV72579.1
FIG00605441: hypothetical protein.
 
     0.624
SFV72943.1
FIG00602270: hypothetical protein.
 
     0.593
SFV74138.1
Metal dependent phosphohydrolase.
  
     0.589
SFV73819.1
Membrane protein, putative.
  
     0.581
SFV73781.1
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives.
  
     0.566
SFV73369.1
FIG00605289: hypothetical protein.
  
     0.564
SFV72748.1
TRASH.
  
     0.526
Your Current Organism:
Desulfovibrio piger
NCBI taxonomy Id: 901
Other names: ATCC 29098, D. piger, DSM 749, Desulfomonas pigra
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