Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H355_003399LIM zinc-binding domain-containing protein. (147 aa)    
Predicted Functional Partners:
H355_007305
Uncharacterized protein.
    
 0.645
H355_000695
Uncharacterized protein.
    
 0.645
H355_011522
Uncharacterized protein.
    
 0.644
H355_001806
Vang-like protein.
    
 0.644
H355_009543
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.527
H355_006594
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.527
H355_001131
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.527
H355_015756
Uncharacterized protein.
    
  0.483
H355_016072
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
    
  0.470
H355_011188
Ras-associating domain-containing protein.
   
  0.461
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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