Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H355_000244Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)    
Predicted Functional Partners:
H355_003984
Cyclin N-terminal domain-containing protein.
   
 0.998
H355_015913
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.998
H355_015506
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.992
H355_004872
WD_REPEATS_REGION domain-containing protein.
   
 0.989
H355_000076
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.989
H355_002115
E2F_TDP domain-containing protein.
   
 0.987
H355_006700
AAA domain-containing protein.
   
 0.985
H355_000919
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.985
H355_003912
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.985
H355_012005
Cmyb_C domain-containing protein.
   
 0.983
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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