STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_007862Rab-GAP TBC domain-containing protein. (306 aa)    
Predicted Functional Partners:
H355_016124
Protein kinase domain-containing protein.
    
  0.947
H355_011458
Uncharacterized protein.
    
 0.654
H355_005482
Uncharacterized protein.
    
 0.654
H355_002949
Uncharacterized protein.
    
 0.654
H355_004228
Protein kinase domain-containing protein.
    
  0.650
H355_003497
Uncharacterized protein.
    
 0.648
H355_014463
Uncharacterized protein.
    
 0.648
H355_004061
Protein kinase domain-containing protein.
    
  0.621
H355_011624
Uncharacterized protein; Belongs to the small heat shock protein (HSP20) family.
      
 0.610
H355_000638
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.588
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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