STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_003405Uncharacterized protein. (518 aa)    
Predicted Functional Partners:
H355_012502
Uncharacterized protein.
    
  0.988
H355_002004
Uncharacterized protein.
  
 0.967
H355_000743
WD_REPEATS_REGION domain-containing protein.
  
  
 
0.941
H355_008733
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.940
H355_015592
Uncharacterized protein.
    
 
 0.927
H355_012096
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.915
H355_013887
Uncharacterized protein.
    
  0.913
H355_016989
Uncharacterized protein.
   
 0.894
H355_016100
SANT domain-containing protein.
   
 0.894
H355_016101
GPS2_interact domain-containing protein.
   
 0.894
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.