Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H355_010637Nkap_C domain-containing protein. (413 aa)    
Predicted Functional Partners:
H355_012015
Uncharacterized protein.
    
 0.992
H355_012486
Uncharacterized protein.
   
  0.988
H355_016476
Uncharacterized protein.
    
 0.985
H355_003786
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.982
H355_008852
Uncharacterized protein.
    
  0.981
H355_000655
Uncharacterized protein.
   
 0.981
H355_006077
Uncharacterized protein.
    
 0.980
H355_011262
Uncharacterized protein.
   
 
 0.972
H355_009537
PPIase cyclophilin-type domain-containing protein.
   
 0.965
H355_010647
Uncharacterized protein.
     
 0.955
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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