STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_000879Matrin-type domain-containing protein. (675 aa)    
Predicted Functional Partners:
H355_000698
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.716
H355_001451
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.662
H355_010350
AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]
    
  0.649
H355_008056
ACB domain-containing protein.
    
  0.631
H355_013341
Uncharacterized protein.
   
 0.608
H355_017153
Enhancer of rudimentary homolog; May have a role in the cell cycle.
    
 
 0.603
H355_015197
Uncharacterized protein.
    
  0.583
H355_015069
Uncharacterized protein.
    
  0.583
H355_011268
Uncharacterized protein.
    
  0.571
H355_005399
LisH domain-containing protein.
   
 0.570
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.