STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_005261Amidohydro-rel domain-containing protein. (572 aa)    
Predicted Functional Partners:
H355_004399
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
  
 0.938
H355_009124
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.926
H355_008759
OMPdecase domain-containing protein.
  
 
 0.919
H355_010128
Uncharacterized protein.
  
 
 0.882
H355_005163
Uncharacterized protein.
  
 0.816
H355_010366
Protein kinase domain-containing protein.
     
 0.789
H355_012753
Uncharacterized protein; Belongs to the semaphorin family.
     
 0.782
H355_010489
Uncharacterized protein; Belongs to the semaphorin family.
     
 0.782
H355_013551
Uncharacterized protein; Belongs to the cytochrome b5 family.
  
 
 0.756
H355_005331
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
  
 
 0.750
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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