STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_005210Uncharacterized protein. (107 aa)    
Predicted Functional Partners:
H355_010663
Plug_translocon domain-containing protein.
   
 0.927
H355_010662
Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.
   
 0.927
H355_001348
Plug_translocon domain-containing protein.
   
 0.927
H355_005209
Uncharacterized protein.
 
     0.919
H355_004795
Tim44 domain-containing protein.
   
 
 0.894
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
 0.891
H355_014278
SRP54 domain-containing protein.
  
 
 0.864
H355_014802
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 0.860
H355_006592
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.856
H355_014897
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
   0.854
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.