STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_001825ERCC4 domain-containing protein. (270 aa)    
Predicted Functional Partners:
H355_014815
ERCC4 domain-containing protein.
  
  
0.969
H355_005695
Uncharacterized protein.
    
 0.818
H355_015043
Uncharacterized protein.
    
 0.798
H355_013722
Uncharacterized protein.
   
 0.786
H355_011140
Helicase C-terminal domain-containing protein.
    
 0.774
H355_001872
BTB domain-containing protein.
    
 0.770
H355_009984
RAD51_interact domain-containing protein.
     
 0.769
H355_000396
ERCC4 domain-containing protein.
    
 0.768
H355_004334
Tudor domain-containing protein.
    
 0.767
H355_001553
Uncharacterized protein.
    
 0.710
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.