STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_007010Uncharacterized protein. (950 aa)    
Predicted Functional Partners:
H355_013286
Peptidase S72 domain-containing protein.
   
 0.825
H355_002612
Peptidase S72 domain-containing protein.
   
 0.825
H355_015957
Uncharacterized protein.
    
 0.802
H355_015960
Uncharacterized protein.
    
 0.728
H355_005387
Uncharacterized protein.
    
0.726
H355_010811
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.717
H355_013906
Uncharacterized protein.
    
 0.716
H355_006048
KOW domain-containing protein.
    
  0.712
H355_016596
Uncharacterized protein; Belongs to the peptidase C1 family.
    
 0.708
H355_002262
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  0.702
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
Server load: low (24%) [HD]