STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_004878Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (445 aa)    
Predicted Functional Partners:
H355_001007
CA domain-containing protein.
 
 
 
 0.802
H355_002004
Uncharacterized protein.
    
 0.783
H355_004434
Uncharacterized protein.
    
 0.757
H355_011950
Uncharacterized protein.
    
 0.757
H355_006537
CA domain-containing protein.
 
 
 
  0.731
H355_002088
Uncharacterized protein.
    
 0.675
H355_016140
Uncharacterized protein.
    
 0.675
H355_016139
Uncharacterized protein.
    
 0.675
H355_000021
CA domain-containing protein.
 
   
 0.653
H355_012115
Uncharacterized protein.
    
 0.629
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.