STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_003525SWIM-type domain-containing protein. (1894 aa)    
Predicted Functional Partners:
H355_010668
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.697
H355_001054
RING-type domain-containing protein.
     
 0.535
H355_014958
Zf-rbx1 domain-containing protein.
     
 0.535
H355_012745
25A_SYNTH_3 domain-containing protein.
     
 0.531
H355_010308
Uncharacterized protein.
      
 0.517
H355_012519
CULLIN_2 domain-containing protein; Belongs to the cullin family.
     
 0.474
H355_004790
Uncharacterized protein.
    
 
 0.447
H355_007190
Uncharacterized protein.
      
 0.426
H355_009922
VWFA domain-containing protein.
      
 0.400
H355_009923
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
      
 0.400
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.