STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_008502RRM domain-containing protein. (244 aa)    
Predicted Functional Partners:
H355_008325
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.817
H355_015141
Uncharacterized protein.
    
 
 0.777
H355_011144
Peptidylprolyl isomerase.
    
   0.667
H355_007554
Peptidylprolyl isomerase.
    
   0.667
H355_010798
Peptidylprolyl isomerase.
    
   0.667
H355_016010
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
    
   0.666
H355_008323
Uncharacterized protein.
    
   0.663
H355_013667
Uncharacterized protein.
    
   0.661
H355_006048
KOW domain-containing protein.
    
   0.660
H355_000233
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.657
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.