STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_003757MARVEL domain-containing protein. (107 aa)    
Predicted Functional Partners:
H355_016461
MFS domain-containing protein.
      
 0.531
H355_009544
GRASP55_65 domain-containing protein.
   
  
 0.529
H355_001430
Uncharacterized protein.
      
 0.525
H355_000158
MARVEL domain-containing protein.
   
  
 0.480
H355_002110
Uncharacterized protein.
      
 0.468
H355_005623
TIR domain-containing protein.
      
 0.445
H355_004226
Uncharacterized protein.
   
  
 0.426
H355_008218
Ig-like domain-containing protein.
      
 0.424
H355_016436
Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family.
      
 0.408
H355_004603
Uncharacterized protein.
      
 0.408
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.