STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_008994AA_TRNA_LIGASE_II domain-containing protein. (470 aa)    
Predicted Functional Partners:
H355_015222
Uncharacterized protein.
  
0.996
H355_001451
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.983
H355_000539
Tyrosine--tRNA ligase.
  
 0.973
H355_015218
Uncharacterized protein.
   
 0.959
H355_007372
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.954
H355_002651
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.952
H355_015044
tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.952
H355_007884
Uncharacterized protein.
   
 0.949
H355_007883
Uncharacterized protein.
   
 0.949
H355_007882
tRNA-synt_1 domain-containing protein.
   
 0.949
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.