STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_009019CTF/NF-I domain-containing protein. (215 aa)    
Predicted Functional Partners:
H355_010299
Uncharacterized protein.
 
      0.866
H355_015712
HMG box domain-containing protein.
    
 
 0.711
H355_009491
Uncharacterized protein.
 
 
    0.642
H355_005893
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
 0.557
H355_009012
Calponin-homology (CH) domain-containing protein.
      
 0.499
H355_015806
HMG box domain-containing protein.
    
 
 0.493
H355_013737
BHLH domain-containing protein.
      
 0.437
H355_013045
BHLH domain-containing protein.
      
 0.437
H355_008046
Uncharacterized protein.
    
 
 0.429
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.