STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H355_009440Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (810 aa)    
Predicted Functional Partners:
H355_008431
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.997
H355_007100
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.994
H355_001438
Uncharacterized protein.
   
 0.993
H355_012219
WD_REPEATS_REGION domain-containing protein.
   
 0.992
H355_015932
Uncharacterized protein.
   
0.986
H355_003520
Uncharacterized protein.
   
0.983
H355_001526
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.982
H355_016277
Uncharacterized protein.
   
0.978
H355_015578
Uncharacterized protein.
   
0.974
H355_015579
Uncharacterized protein.
   
 0.961
Your Current Organism:
Colinus virginianus
NCBI taxonomy Id: 9014
Other names: C. virginianus, bobwhite quail, common bobwhite, northern bobwhite
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