STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOS21574.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)    
Predicted Functional Partners:
OOS21576.1
Type II secretion system protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.846
OOS21577.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
OOS21575.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
OOS20247.1
YgfB and YecA protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0149 family.
  
     0.755
OOS20751.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
OOS19441.1
Type IV pilus modification protein PilV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
OOS22577.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.736
OOS21573.1
TatD family deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.729
OOS19449.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
OOS21578.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.722
Your Current Organism:
Moraxella lincolnii
NCBI taxonomy Id: 90241
Other names: ATCC 51388, CCUG 9405, CIP 103802, LMG 5127, LMG:5127, M. lincolnii
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