STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ230_09335Unannotated protein. (81 aa)    
Predicted Functional Partners:
fadA
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
       0.438
CJ230_00230
Unannotated protein.
  
     0.415
CJ230_09345
Unannotated protein.
  
    0.409
Your Current Organism:
Oligella urethralis
NCBI taxonomy Id: 90245
Other names: ATCC 17960, CCUG 13463, CCUG 37823, CDC 7603, CIP 103116, DSM 7531, IFO 14589, JCM 20913, LMG 5303, LMG:5303, Moraxella urethralis, NBRC 14589, NCTC 12964, O. urethralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.