Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ230_01585 | CJ230_05070 | GCA_001056285_02032 | GCA_001056285_01402 | Unannotated protein. | Unannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | 0.718 |
CJ230_01585 | CJ230_05675 | GCA_001056285_02032 | GCA_001056285_02176 | Unannotated protein. | Unannotated protein. | 0.732 |
CJ230_01585 | CJ230_06105 | GCA_001056285_02032 | GCA_001056285_01012 | Unannotated protein. | Unannotated protein. | 0.656 |
CJ230_01585 | lptA | GCA_001056285_02032 | GCA_001056285_01007 | Unannotated protein. | Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.734 |
CJ230_01585 | lptC | GCA_001056285_02032 | GCA_001056285_01006 | Unannotated protein. | Unannotated protein. | 0.545 |
CJ230_01585 | lptE | GCA_001056285_02032 | GCA_001056285_00933 | Unannotated protein. | Unannotated protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. | 0.662 |
CJ230_01585 | priB | GCA_001056285_02032 | GCA_001056285_00947 | Unannotated protein. | Unannotated protein; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. | 0.578 |
CJ230_05070 | CJ230_01585 | GCA_001056285_01402 | GCA_001056285_02032 | Unannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Unannotated protein. | 0.718 |
CJ230_05070 | CJ230_05675 | GCA_001056285_01402 | GCA_001056285_02176 | Unannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Unannotated protein. | 0.763 |
CJ230_05070 | CJ230_06105 | GCA_001056285_01402 | GCA_001056285_01012 | Unannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Unannotated protein. | 0.627 |
CJ230_05070 | lptA | GCA_001056285_01402 | GCA_001056285_01007 | Unannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.754 |
CJ230_05070 | lptC | GCA_001056285_01402 | GCA_001056285_01006 | Unannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Unannotated protein. | 0.566 |
CJ230_05070 | lptE | GCA_001056285_01402 | GCA_001056285_00933 | Unannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Unannotated protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. | 0.619 |
CJ230_05070 | priB | GCA_001056285_01402 | GCA_001056285_00947 | Unannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | Unannotated protein; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. | 0.721 |
CJ230_05675 | CJ230_01585 | GCA_001056285_02176 | GCA_001056285_02032 | Unannotated protein. | Unannotated protein. | 0.732 |
CJ230_05675 | CJ230_05070 | GCA_001056285_02176 | GCA_001056285_01402 | Unannotated protein. | Unannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | 0.763 |
CJ230_05675 | CJ230_06105 | GCA_001056285_02176 | GCA_001056285_01012 | Unannotated protein. | Unannotated protein. | 0.612 |
CJ230_05675 | lptA | GCA_001056285_02176 | GCA_001056285_01007 | Unannotated protein. | Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.735 |
CJ230_05675 | lptC | GCA_001056285_02176 | GCA_001056285_01006 | Unannotated protein. | Unannotated protein. | 0.650 |
CJ230_05675 | lptE | GCA_001056285_02176 | GCA_001056285_00933 | Unannotated protein. | Unannotated protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. | 0.722 |
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