STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ230_02120Unannotated protein. (402 aa)    
Predicted Functional Partners:
CJ230_01570
Unannotated protein.
  
 
   0.771
lptC
Unannotated protein.
  
     0.765
CJ230_06670
Unannotated protein.
  
     0.761
mreD
Unannotated protein.
  
     0.756
CJ230_00090
Unannotated protein.
  
     0.750
CJ230_02840
Unannotated protein.
  
     0.733
CJ230_01695
Unannotated protein.
  
     0.730
lptE
Unannotated protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.
  
   
 0.729
CJ230_06180
Unannotated protein.
  
     0.724
CJ230_01585
Unannotated protein.
  
     0.723
Your Current Organism:
Oligella urethralis
NCBI taxonomy Id: 90245
Other names: ATCC 17960, CCUG 13463, CCUG 37823, CDC 7603, CIP 103116, DSM 7531, IFO 14589, JCM 20913, LMG 5303, LMG:5303, Moraxella urethralis, NBRC 14589, NCTC 12964, O. urethralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.