A0A1X2HKP4 protein (Absidia repens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A1X2HKP4

NmrA domain-containing protein. (298 aa)

Predicted Functional Partners:

A0A1X2I7U5

0.882

A0A1X2IE69

0.826

A0A1X2I4D9

0.825

A0A1X2IAA7

0.808

A0A1X2IIH0

0.803

A0A1X2IV59

0.803

A0A1X2INT6

0.800

A0A1X2IVY3

0.796

A0A1X2IZV5

0.796

A0A1X2IQ20

0.785

Your Current Organism:

Absidia repens

NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1X2HKP4	A0A1X2I4D9	NmrA domain-containing protein.	Uncharacterized protein.	0.825
A0A1X2HKP4	A0A1X2I7U5	NmrA domain-containing protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.882
A0A1X2HKP4	A0A1X2IAA7	NmrA domain-containing protein.	Zinc-finger domain-domain-containing protein.	0.808
A0A1X2HKP4	A0A1X2IE69	NmrA domain-containing protein.	ETC complex I subunit conserved region-domain-containing protein.	0.826
A0A1X2HKP4	A0A1X2IIH0	NmrA domain-containing protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.803
A0A1X2HKP4	A0A1X2INT6	NmrA domain-containing protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.800
A0A1X2HKP4	A0A1X2IQ20	NmrA domain-containing protein.	Thioredoxin-like protein.	0.785
A0A1X2HKP4	A0A1X2IV59	NmrA domain-containing protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.803
A0A1X2HKP4	A0A1X2IVY3	NmrA domain-containing protein.	Cytochrome C1 family-domain-containing protein.	0.796
A0A1X2HKP4	A0A1X2IZV5	NmrA domain-containing protein.	Cytochrome c1.	0.796
A0A1X2I4D9	A0A1X2HKP4	Uncharacterized protein.	NmrA domain-containing protein.	0.825
A0A1X2I4D9	A0A1X2I7U5	Uncharacterized protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.998
A0A1X2I4D9	A0A1X2IAA7	Uncharacterized protein.	Zinc-finger domain-domain-containing protein.	0.998
A0A1X2I4D9	A0A1X2IE69	Uncharacterized protein.	ETC complex I subunit conserved region-domain-containing protein.	0.998
A0A1X2I4D9	A0A1X2IIH0	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.994
A0A1X2I4D9	A0A1X2INT6	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.998
A0A1X2I4D9	A0A1X2IQ20	Uncharacterized protein.	Thioredoxin-like protein.	0.998
A0A1X2I4D9	A0A1X2IV59	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.994
A0A1X2I4D9	A0A1X2IVY3	Uncharacterized protein.	Cytochrome C1 family-domain-containing protein.	0.973
A0A1X2I4D9	A0A1X2IZV5	Uncharacterized protein.	Cytochrome c1.	0.973