STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HZ95Ras guanine nucleotide exchange factor domain-containing protein. (973 aa)    
Predicted Functional Partners:
A0A1X2I675
Small GTPase.
    
 0.971
A0A1X2IKT7
Rab-GTPase-TBC domain-domain-containing protein.
    
 
 0.892
A0A1X2I7E6
NRDE-2, necessary for RNA interference-domain-containing protein.
    
 
 0.863
A0A1X2IIF5
Cell division control protein 42.
    
 0.778
A0A1X2IVB1
Cell division control protein 42.
    
 0.778
A0A1X2HZN8
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 
 0.703
A0A1X2I154
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 
 0.703
A0A1X2IUS8
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 
 0.703
A0A1X2IK01
Uncharacterized protein.
    
 
 0.701
A0A1X2IWZ0
Uncharacterized protein.
    
 
 0.701
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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