STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2I2A040S ribosomal protein S20. (122 aa)    
Predicted Functional Partners:
A0A1X2ID90
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.998
A0A1X2IF55
Ribosomal protein S11.
  
 0.998
A0A1X2HYT0
40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.
   
 0.997
A0A1X2IA90
Uncharacterized protein.
   
 0.996
A0A1X2IPX8
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.996
A0A1X2HZ15
40S ribosomal protein S22-A; Belongs to the universal ribosomal protein uS8 family.
  
 0.995
A0A1X2I666
40S ribosomal protein S22-A; Belongs to the universal ribosomal protein uS8 family.
  
 0.995
A0A1X2IGV3
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.995
A0A1X2ITT9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.995
A0A1X2I5A4
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.994
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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