STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2I2E7FYVE-type domain-containing protein. (1069 aa)    
Predicted Functional Partners:
A0A1X2IB77
UEV domain-domain-containing protein.
    
 0.965
A0A1X2IQJ4
Polyubiquitin.
    
  0.876
A0A1X2IUN1
Polyubiquitin 5.
    
  0.876
A0A1X2IYB3
Uncharacterized protein.
    
  0.876
A0A1X2IA90
Uncharacterized protein.
    
  0.845
A0A1X2IHI9
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.821
A0A1X2J0Y1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.821
A0A1X2IUC8
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 0.820
A0A1X2I195
Ribosomal protein S27a-domain-containing protein.
    
  0.813
A0A1X2ICM3
Ribosomal protein S27a-domain-containing protein.
    
  0.813
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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