STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2I5G3Ubiquitin-like domain-containing protein. (592 aa)    
Predicted Functional Partners:
A0A1X2I4F5
Uncharacterized protein.
    
 0.986
A0A1X2IBY5
Uncharacterized protein.
    
 0.986
A0A1X2IY44
Ubiquitin-related domain-containing protein.
    
 
 0.985
A0A1X2IZ04
PPPDE putative peptidase domain-domain-containing protein.
    
   0.983
GET3-2
ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]
    
 0.915
A0A1X2IXF4
SGTA_dimer domain-containing protein.
   
 0.910
A0A1X2IDW9
PPPDE putative peptidase domain-domain-containing protein.
    
   0.832
A0A1X2IGD5
RING-type domain-containing protein.
    
 
 0.825
A0A1X2IMK7
RING-type domain-containing protein.
    
 
 0.825
A0A1X2IU47
RING-type domain-containing protein.
    
 
 0.825
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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