STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2I7J7Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
A0A1X2IMR3
Uncharacterized protein.
    
  0.741
A0A1X2IV80
Uncharacterized protein.
    
  0.741
A0A1X2IDD9
WD40-repeat-containing domain protein.
    
 0.695
A0A1X2I0V6
B30.2/SPRY domain-containing protein.
    
 0.692
A0A1X2I8Q6
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.670
A0A1X2ICP2
Nucleoporin_C domain-containing protein.
    
 0.666
A0A1X2HH97
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.653
A0A1X2IUB1
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.653
A0A1X2IA90
Uncharacterized protein.
    
 0.601
A0A1X2IIQ3
Ubiquitin-related domain-containing protein.
    
  0.593
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.