STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2IF51Uncharacterized protein. (337 aa)    
Predicted Functional Partners:
A0A1X2ID74
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
    
 0.816
A0A1X2IT01
SPX domain-domain-containing protein.
    
 0.816
A0A1X2IYJ0
GP-PDE domain-containing protein.
    
 0.816
A0A1X2I5A8
ATP dependent DNA ligase domain-domain-containing protein; Belongs to the ATP-dependent DNA ligase family.
    
 0.702
A0A1X2I8S5
SPOC like C-terminal domain-containing protein.
    
 0.693
A0A1X2IZE3
SPOC like C-terminal domain-containing protein.
    
 0.647
A0A1X2I5P9
DNA ligase.
    
 0.590
A0A1X2I4F0
Serine/threonine-protein kinase pef1; Belongs to the protein kinase superfamily.
    
 0.523
A0A1X2IC37
Serine/threonine-protein kinase pef1; Belongs to the protein kinase superfamily.
    
 0.523
A0A1X2IDG5
Protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.523
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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