STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2IN67Sorting nexin-3. (159 aa)    
Predicted Functional Partners:
A0A1X2I6V0
Putative PEP8-vacuolar protein sorting/targeting protein.
    
 0.963
A0A1X2IMV9
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.963
A0A1X2IZI9
Putative PEP8-vacuolar protein sorting/targeting protein.
    
 0.963
A0A1X2J1X3
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.963
A0A1X2IPG7
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.859
A0A1X2IX00
Sec20-domain-containing protein.
     
 0.716
A0A1X2INN1
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.709
A0A1X2IRV7
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.709
A0A1X2I1X5
Uncharacterized protein.
    
 0.592
A0A1X2I6C4
Uncharacterized protein.
    
 0.592
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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