STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2IWZ1THO complex subunit 1 transcription elongation factor-domain-containing protein. (719 aa)    
Predicted Functional Partners:
A0A1X2IHA2
Uncharacterized protein.
    
 0.999
A0A1X2IQ99
Fms-interacting protein-domain-containing protein.
   
 0.999
A0A1X2IWR6
DExH-box splicing factor binding site-domain-containing protein.
   
 0.999
A0A1X2IKW8
WD40-repeat-containing domain protein.
    
 0.989
A0A1X2J2D7
WD40-repeat-containing domain protein.
    
 0.989
A0A1X2I295
ATP-dependent RNA helicase uap56.
   
 0.977
A0A1X2I815
ATP-dependent RNA helicase uap56.
   
 0.977
A0A1X2HXR3
RRM domain-containing protein.
    
 0.937
A0A1X2I5H4
RRM domain-containing protein.
    
 0.937
A0A1X2IQY2
RRM domain-containing protein.
    
 0.937
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.