STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2IYM1NodB homology domain-containing protein. (258 aa)    
Predicted Functional Partners:
A0A1X2I279
Uncharacterized protein.
    
 0.786
A0A1X2ISS2
Uncharacterized protein.
    
 0.786
A0A1X2IN90
D-ser_dehydrat domain-containing protein.
    
 0.752
A0A1X2J312
Ribokinase-like protein.
    
 0.704
A0A1X2IZB4
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.700
A0A1X2I944
Uncharacterized protein.
    
   0.697
A0A1X2IN17
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.678
A0A1X2I4P7
Zn_dep_PLPC domain-containing protein.
    
 0.667
A0A1X2IKH3
MHYT domain-containing protein.
    
 0.666
A0A1X2ISS9
MHYT domain-containing protein.
    
 0.666
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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