STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2IZ85WD40-repeat-containing domain protein. (541 aa)    
Predicted Functional Partners:
A0A1X2I0V6
B30.2/SPRY domain-containing protein.
    
 0.949
A0A1X2IDD9
WD40-repeat-containing domain protein.
   
0.949
A0A1X2IN17
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.902
A0A1X2IA90
Uncharacterized protein.
    
 0.846
A0A1X2IUN1
Polyubiquitin 5.
    
  0.817
A0A1X2I2X9
Uncharacterized protein.
    
 0.808
A0A1X2IE68
Uncharacterized protein.
   
 0.808
A0A1X2II21
Uncharacterized protein.
   
 0.808
A0A1X2IP81
Histone methyltransferase.
   
 0.808
A0A1X2I177
Histone H3.
    
 0.804
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.