STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2J330Velvet factor-domain-containing protein. (290 aa)    
Predicted Functional Partners:
A0A1X2I279
Uncharacterized protein.
    
 0.857
A0A1X2ISS2
Uncharacterized protein.
    
 0.857
A0A1X2HWZ9
WD40-repeat-containing domain protein.
   
 0.698
A0A1X2I5U6
Rix1 complex component.
    
 0.673
A0A1X2I4C4
Uncharacterized protein.
    
  0.583
A0A1X2IIY0
Centromere protein Cenp-K.
    
  0.578
A0A1X2IDE0
Las1-like-domain-containing protein.
    
  0.574
A0A1X2IYI0
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.573
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.551
A0A1X2I3T6
Calponin homology domain-containing protein.
    
 0.534
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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