STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCOLCE2Procollagen C-endopeptidase enhancer 2. (408 aa)    
Predicted Functional Partners:
COL20A1
Uncharacterized protein.
    
 
 0.763
C2H8ORF22
Uncharacterized protein.
      
 0.707
LOC424919
Photolyase/cryptochrome alpha/beta domain-containing protein.
      
 0.701
VWA1
Von Willebrand factor A domain containing 1.
    
 
 0.667
ASTL
Astacin-like metalloendopeptidase; Probable oocyte-specific oolemmal receptor involved in sperm and egg adhesion and fertilization. May act as a protease (By similarity).
 
 
 
0.624
ASB2
Ankyrin repeat and SOCS box containing 2.
   
  
 0.593
COL16A1
Uncharacterized protein.
    
 
 0.589
COL16A1-2
LAM_G_DOMAIN domain-containing protein.
    
 
 0.588
COL22A1
VWFA domain-containing protein.
    
 
 0.583
PLAC9
Uncharacterized protein.
      
 0.582
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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