STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSMA4Proteasome subunit alpha type. (261 aa)    
Predicted Functional Partners:
PSMD7
Proteasome 26S subunit, non-ATPase 7.
   
 0.999
PSMB7
Proteasome subunit beta.
   
 0.999
PSMB3
Proteasome subunit beta.
   
 0.999
PSMA6
Proteasome subunit alpha type.
   
0.999
PSMC1
26S proteasome regulatory subunit 4; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.
   
 0.999
PSMD14
MPN domain-containing protein.
   
 0.999
PSMB1
Proteasome subunit beta.
   
 0.999
PSMA3
Proteasome subunit alpha type.
   
0.999
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
PSMC3
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.999
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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