STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO42F-box protein 42. (764 aa)    
Predicted Functional Partners:
FBXO47
F-box protein 47.
      
 0.852
C7orf26
Chromosome 7 open reading frame 26.
      
 0.784
ZDHHC4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.764
MRM2
FtsJ domain-containing protein.
   
 
 0.762
ATP13A1
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
 
 0.756
NUDCD3
NudC domain containing 3.
   
 
 0.722
HERPUD2
HERPUD family member 2.
   
  
 0.715
CUL1
Cullin 1; Belongs to the cullin family.
    
 
 0.710
VOPP1
VOPP1 WW domain binding protein.
      
 0.707
EXOC3
Uncharacterized protein.
      
 0.705
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.