STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIMS4Regulating synaptic membrane exocytosis 4. (446 aa)    
Predicted Functional Partners:
RIMS1-2
PDZ domain-containing protein.
 
 
    0.900
ENSGALP00000065007
Uncharacterized protein.
 
 
    0.900
ZNF804B
Zinc finger protein 804B.
   
  
 0.793
CACNG5
Calcium voltage-gated channel auxiliary subunit gamma 5.
   
  
 0.754
GLRA3
Glycine receptor alpha 3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.672
RAB3C
RAB3C, member RAS oncogene family.
    
 
 0.630
CHRNB3
Neuronal acetylcholine receptor subunit beta-3; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane; Belongs to the ligand-gated ion channel (TC 1.A.9) family. Acetylcholine receptor (TC 1.A.9.1) subfamily. Beta-3/CHRNB3 sub- subfamily.
    
 
 0.626
PYURF
PIGY upstream reading frame.
      
 0.625
PREX1
Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1.
   
  
 0.610
SNX29
Sorting nexin 29.
      
 0.560
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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