RPL36AL protein (Gallus gallus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RPL36AL

Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family. (105 aa)

Predicted Functional Partners:

RPL38

0.999

RPL23

0.999

RPS10

0.999

RPL23A

0.999

RPS2

0.999

RPL27A

0.999

RPS13

0.999

RPLP0

0.999

RPL35A

0.999

RPS25

0.999

Your Current Organism:

Gallus gallus

NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPL23	RPL23A	ENSGALP00000002493	ENSGALP00000006308	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.999
RPL23	RPL27A	ENSGALP00000002493	ENSGALP00000009552	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
RPL23	RPL35A	ENSGALP00000002493	ENSGALP00000012293	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Uncharacterized protein.	0.999
RPL23	RPL36AL	ENSGALP00000002493	ENSGALP00000007927	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
RPL23	RPL38	ENSGALP00000002493	ENSGALP00000002218	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
RPL23	RPLP0	ENSGALP00000002493	ENSGALP00000011717	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10; Belongs to the universal ribosomal protein uL10 family.	0.999
RPL23	RPS10	ENSGALP00000002493	ENSGALP00000004437	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	S10_plectin domain-containing protein.	0.999
RPL23	RPS13	ENSGALP00000002493	ENSGALP00000009821	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999
RPL23	RPS2	ENSGALP00000002493	ENSGALP00000008802	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
RPL23	RPS25	ENSGALP00000002493	ENSGALP00000012462	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
RPL23A	RPL23	ENSGALP00000006308	ENSGALP00000002493	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.999
RPL23A	RPL27A	ENSGALP00000006308	ENSGALP00000009552	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
RPL23A	RPL35A	ENSGALP00000006308	ENSGALP00000012293	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein.	0.999
RPL23A	RPL36AL	ENSGALP00000006308	ENSGALP00000007927	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
RPL23A	RPL38	ENSGALP00000006308	ENSGALP00000002218	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
RPL23A	RPLP0	ENSGALP00000006308	ENSGALP00000011717	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10; Belongs to the universal ribosomal protein uL10 family.	0.999
RPL23A	RPS10	ENSGALP00000006308	ENSGALP00000004437	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	S10_plectin domain-containing protein.	0.999
RPL23A	RPS13	ENSGALP00000006308	ENSGALP00000009821	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999
RPL23A	RPS2	ENSGALP00000006308	ENSGALP00000008802	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
RPL23A	RPS25	ENSGALP00000006308	ENSGALP00000012462	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999