STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS18ADAM metallopeptidase with thrombospondin type 1 motif 18. (1228 aa)    
Predicted Functional Partners:
PPP4R4
Protein phosphatase 4 regulatory subunit 4.
      
 0.702
QPCT
Glutaminyl-peptide cyclotransferase.
      
 0.674
ASPN
Asporin.
      
 0.673
EXO1
Uncharacterized protein.
   
  
 0.663
SALL4
Uncharacterized protein.
   
  
 0.645
USH1C
USH1 protein network component harmonin.
   
  
 0.638
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
      
 0.628
IRX3
Iroquois homeobox 3.
   
  
 0.626
ADAMTSL5
ADAMTS like 5.
     
0.616
ADAMTS2
ADAM metallopeptidase with thrombospondin type 1 motif 2.
  
  
0.612
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.