STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSLNMesothelin. (655 aa)    
Predicted Functional Partners:
UPK3B
Uroplakin 3B.
   
  
 0.753
PSCA
Prostate stem cell antigen.
   
  
 0.698
WT1
Uncharacterized protein.
   
 
 0.610
LRRN4
Leucine rich repeat neuronal 4.
   
  
 0.551
SELENBP1
Uncharacterized protein.
      
 0.519
MUC16
Uncharacterized protein.
   
  
 0.502
FAM20C
FAM20C golgi associated secretory pathway kinase.
     
  0.499
CTLA4
Cytotoxic T-lymphocyte-associated protein 4.
      
 0.487
ALS2CL
ALS2 C-terminal like.
   
  
 0.481
CD8A-2
Ig-like domain-containing protein.
      
 0.477
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.