STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSM1Small G protein signaling modulator 1. (1111 aa)    
Predicted Functional Partners:
POLR1D
RNA polymerase I and III subunit D.
      
 0.771
TCERG1L
Transcription elongation regulator 1 like.
      
 0.769
ARHGEF10L
Rho guanine nucleotide exchange factor 10 like.
      
 0.763
DPYSL4
Dihydropyrimidinase like 4.
      
 0.737
ARHGEF11
Rho guanine nucleotide exchange factor 11.
      
 0.704
INPP5A
Inositol polyphosphate-5-phosphatase A.
      
 0.695
CDK13
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.645
USP4
Ubiquitin carboxyl-terminal hydrolase.
   
  
 0.603
GLT1D1
Glycos_transf_1 domain-containing protein.
      
 0.585
CSNK1D
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.580
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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