STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAAT1LRAT domain-containing protein. (169 aa)    
Predicted Functional Partners:
PEX2
RING-type domain-containing protein.
      
 0.749
PEX5L
Peroxisomal biogenesis factor 5 like.
    
 
 0.712
ABHD12B
AB hydrolase-1 domain-containing protein.
   
 
 0.709
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
  
 0.708
GASK1B
Golgi associated kinase 1B.
      
 0.705
STARD10
START domain-containing protein.
      
 0.683
GAK
J domain-containing protein.
    
 
 0.683
ENSGALP00000073953
Uncharacterized protein.
    
 
 0.683
SLC10A7
Sodium/bile acid cotransporter 7; Involved in teeth and skeletal development. Has an essential role in the biosynthesis and trafficking of glycosaminoglycans and glycoproteins to produce a proper functioning extracellular matrix. Required for extracellular matrix mineralization. Also involved in the regulation of cellular calcium homeostasis. Does not show transport activity towards bile acids or steroid sulfates. Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.
      
 0.679
YME1L1
AAA domain-containing protein.
  
 
 0.673
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.