STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEM1CFem-1 homolog C. (617 aa)    
Predicted Functional Partners:
AAGAB
Uncharacterized protein.
      
 0.846
CUL2
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.816
GRAMD2B
GRAM domain containing 2B.
   
 
 0.787
ZNF608
Zinc finger protein 608.
   
  
 0.760
SLC36A4
Solute carrier family 36 member 4.
      
 0.749
GEMIN5
Gem nuclear organelle associated protein 5.
      
 0.703
TCEB1
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.675
RBX1
RING-type domain-containing protein.
    
 0.642
B4GALT1
Uncharacterized protein.
   
  
 0.629
SLAMF8
CD84.
   
 
 0.627
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.