STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC396480Scale keratin. (156 aa)    
Predicted Functional Partners:
THOC3
WD_REPEATS_REGION domain-containing protein.
      
 0.841
C3orf38
Chromosome 3 open reading frame 38.
      
 0.785
ARL6IP1
Uncharacterized protein.
    
 
 0.710
NPM3
Nucleophosmin/nucleoplasmin 3.
   
  
 0.705
ZC3H10
Zinc finger CCCH-type containing 10.
      
 0.665
KRT12
Keratin 12; Belongs to the intermediate filament family.
   
 
 0.650
RNF213
Ring finger protein 213.
    
 
 0.645
LOC423119
Cytochrome b5 heme-binding domain-containing protein.
   
  
 0.585
RBP7
Retinol binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.580
KRT75
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
 0.555
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.