STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH2G-patch domain-containing protein. (504 aa)    
Predicted Functional Partners:
DHX15
Uncharacterized protein.
   
 
 0.916
CMTR2
Cap methyltransferase 2.
      
 0.846
PINX1
PIN2 (TERF1) interacting telomerase inhibitor 1.
    
 
 0.843
DDX10
Probable ATP-dependent RNA helicase DDX10; Putative ATP-dependent RNA helicase.
    
 
 0.837
NOL6
Nucleolar protein 6.
   
 
 0.837
BYSL
Bystin like.
    
 
 0.835
UTP6
Uncharacterized protein.
   
 
 0.830
NOM1
Nucleolar protein with MIF4G domain 1.
   
   0.825
DIEXF
Digestive organ expansion factor homolog; Regulates the p53 pathway to control the expansion growth of digestive organs; Belongs to the def family.
    
   0.825
DDX18
RNA helicase.
    
   0.825
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.