STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1HProtein phosphatase, Mg2+/Mn2+ dependent 1H. (510 aa)    
Predicted Functional Partners:
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.885
RAB29
RAB29, member RAS oncogene family.
    
 
 0.756
RILPL2
Rab interacting lysosomal protein like 2.
      
 0.711
SLC22A3
Solute carrier family 22 member 3.
   
  
 0.593
SRGAP1
Uncharacterized protein.
      
 0.585
TSHZ1
Teashirt zinc finger homeobox 1.
      
 0.499
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
      
 0.491
INPP5B
Inositol polyphosphate-5-phosphatase B.
      
 0.481
RAB10
Ras-related protein Rab-10; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different set of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. That Rab is mainly involved in the biosynthetic transport of proteins from the Golgi to the plasma membrane. Plays also a specific role in asymmetric protein transport to the plasma mem [...]
    
 
 0.480
ARL13B
ADP ribosylation factor like GTPase 13B.
      
 0.479
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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