Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D9TBC1 domain family member 9. (1265 aa)    
Predicted Functional Partners:
ELMOD2
ELMO domain-containing protein.
      
 0.813
DIRAS2
DIRAS family GTPase 2.
      
 0.780
NACC2
Uncharacterized protein.
      
 0.678
LANCL1
Uncharacterized protein.
    
   0.580
VEGFC
Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family.
   
  
 0.565
SUSD1
Sushi domain containing 1.
      
 0.549
RNF150
Ring finger protein 150.
      
 0.509
RAB39B
RAB39B, member RAS oncogene family.
    
 
 0.499
PLPP3
acidPPc domain-containing protein.
      
 0.494
ABCA3
ATP binding cassette subfamily A member 3.
      
 0.492
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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