STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIP11Thyroid hormone receptor interactor 11. (1980 aa)    
Predicted Functional Partners:
IFT20
Intraflagellar transport 20.
   
 0.964
NHS
NHS actin remodeling regulator.
   
 
 0.859
CCDC27
Uncharacterized protein.
      
 0.846
MIB1
Mindbomb E3 ubiquitin protein ligase 1.
   
 
 0.759
KCTD10
Potassium channel tetramerization domain containing 10.
      
 0.738
BLZF1
Basic leucine zipper nuclear factor 1.
   
 
 0.730
ALPP
Alkaline phosphatase.
   
 0.708
GOLGA2
Uncharacterized protein.
   
 
 0.670
ADGRV1
Uncharacterized protein.
    
 
 0.608
ARF1
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.607
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.